Plant GARDEN
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TOP > About the Species(Nicotiana tabacum var. TN90) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Nicotiana tabacum

CDS Sequence

CDS ID

lcl|NW_015907807.1_cds_XP_016457915.1_51592
CDS Infomation

[gene=LOC107781693] [db_xref=GeneID:107781693] [protein=polygalacturonase-like] [protein_id=XP_016457915.1] [location=complement(join(28589..28813,29267..29495,29570..29859,30325..30759))] [gbkey=CDS]
Sequence

ATGATGGGAAAAATGAGCGTCATAATTCTCATCCTCTTCTTCTTCAACTTGTCAATAGCA
GCAGATTCGATGTATAATGTCCTAAACTATGGAGCAAAATCTGATGGAAAATCCGATTCG
TCCAAGGCTTTTCTTAGTGCATGGACTGCAGCATGTAGTTCTACTAGCCCTGCCACCATT
TTCGTGCCAAAGGGAAGTTACTTGCTTGGTAATGCATATTTCTATGGTCAAACATGCAAG
AGTAATGCCATTACTATACGTATTGATGGCACACTTATAGCTCCATCTGACTATAATGTT
ATTGGGAAATCTGGAAGCTGGATTAAATTCGAACGAGTCAATGGAGTTTCGATCGTTGGT
GGAACCCTAAATGGACAAGGTGCCCGTCTTTGGGCATGCAAAAACTCCGGCAAAGGTTGT
CCTAAAGGAGCTACGACTTTAGCTTTCTACAACTCAAACAACGTTACAATAAGTGGATTA
ACTTCACAAGACAGCCAAATGTTCCACATTTTGTTCGATGGGTGCCATAACGCCAAGTTA
CAAGGAGTGAAGATTTCAGCTCCCGGAAATAGCCCCAACACTGATGGAATTCATTTACAG
TCATCGACTGATGTTACCATCTTGAATTCTCATATTGGAACTGGCGATGATTGTATTTCA
ATTGGTCCTGGCAACTCCAACTTGTGGATCGAAAACATCGCCTGTGGCCCTGGCCATGGA
ATAAGCATTGGGAGCTTAGGTTGGGATATGCAAGAGCCAGGAGTTCAAAACGTGACAGTT
ACAACGGCAACATTTACTGGAACCCAGAATGGAGTGAGGGTCAAAACATGGGCTAGGCCT
AGCAATGGCTTCGTAAGGAATGTTCTTTTTCAACACGCAGTGATGAATAATGTCGATAAT
CCCATCATCATAGATCAAAATTACTGCCCAGATCGTGGAAATTGTCCTAATCAGGGCTCT
GGTATTAAGGTGAGCGATATAAAGTATCACGACATACATGGGACATCGGCCACAGAAGTT
GCAGTAAAATTCGATTGCAGCAAAACAAATCCTTGTAATGAGATAACGCTACAAGACGTG
AATCTTAATTTTAAAGATCATTCAGCTGAAGCTTTATGTGTTAATGCTGGAGGAAGGGCT
TCGGGTCTACAACAACCAAATAGCTGCTTACGAACTTGA

Peptide Sequence

PEP ID

XP_016457915.1
PEP Infomation

PREDICTED: polygalacturonase-like [Nicotiana tabacum]
Sequence

MMGKMSVIILILFFFNLSIAADSMYNVLNYGAKSDGKSDSSKAFLSAWTAACSSTSPATI
FVPKGSYLLGNAYFYGQTCKSNAITIRIDGTLIAPSDYNVIGKSGSWIKFERVNGVSIVG
GTLNGQGARLWACKNSGKGCPKGATTLAFYNSNNVTISGLTSQDSQMFHILFDGCHNAKL
QGVKISAPGNSPNTDGIHLQSSTDVTILNSHIGTGDDCISIGPGNSNLWIENIACGPGHG
ISIGSLGWDMQEPGVQNVTVTTATFTGTQNGVRVKTWARPSNGFVRNVLFQHAVMNNVDN
PIIIDQNYCPDRGNCPNQGSGIKVSDIKYHDIHGTSATEVAVKFDCSKTNPCNEITLQDV
NLNFKDHSAEALCVNAGGRASGLQQPNSCLRT

Transcript Sequence

Gene sequence data has not been registered.